Jahari, Puteri Nur Syahzanani and Mohd. Azman, Shahfiz and Munian, Kaviarasu and Ahmad Ruzman, Nor Hazwani and Shamsir, Mohd. Shahir and Richter, Stine R. and P. Gilbert, M. Thomas and Mohd. Salleh, Faezah (2020) Molecular identification and phylogenetic analysis of a Callosciurus notatus complete mitogenome from Peninsular Malaysia. Mitochondrial DNA Part B: Resources, 5 (3). pp. 3022-3024. ISSN 2380-2359
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Official URL: http://dx.doi.org/10.1080/23802359.2020.1797583
Abstract
The mitogenome of a plantain squirrel, Callosciurus notatus, collected from Bukit Tarek Forest Reserve (Extension), Selangor, Malaysia was sequenced using BGISEQ-500RS technology. The 16,582 bp mitogenome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 control region. A phylogenetic and BLASTn analysis against other available datasets showed that the mitogenome matched with 99.49% similarity to a previously published C. notatus mitogenome from Peninsular Malaysia. However, it also diverged by nearly 8% (92.24% match) from a second previously published mitogenome for the same species, sampled in East Kalimantan, Indonesia. This suggests a difference in landscape features between both localities might affect its genetic connectivity.
| Item Type: | Article |
|---|---|
| Uncontrolled Keywords: | mitogenome, phylogenetic analysis |
| Subjects: | Q Science > Q Science (General) |
| Divisions: | Science |
| ID Code: | 90011 |
| Deposited By: | Widya Wahid |
| Deposited On: | 31 Mar 2021 05:03 |
| Last Modified: | 31 Mar 2021 05:03 |
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