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A new adaptive L1-norm for optimal descriptor selection of high-dimensional QSAR classification model for anti-hepatitis C virus activity of thiourea derivatives

Algamal, Z. Y. and Lee, M. H. (2017) A new adaptive L1-norm for optimal descriptor selection of high-dimensional QSAR classification model for anti-hepatitis C virus activity of thiourea derivatives. SAR and QSAR in Environmental Research, 28 (1). pp. 75-90. ISSN 1062-936X

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Abstract

A high-dimensional quantitative structure–activity relationship (QSAR) classification model typically contains a large number of irrelevant and redundant descriptors. In this paper, a new design of descriptor selection for the QSAR classification model estimation method is proposed by adding a new weight inside L1-norm. The experimental results of classifying the anti-hepatitis C virus activity of thiourea derivatives demonstrate that the proposed descriptor selection method in the QSAR classification model performs effectively and competitively compared with other existing penalized methods in terms of classification performance on both the training and the testing datasets. Moreover, it is noteworthy that the results obtained in terms of stability test and applicability domain provide a robust QSAR classification model. It is evident from the results that the developed QSAR classification model could conceivably be employed for further high-dimensional QSAR classification studies.

Item Type:Article
Uncontrolled Keywords:classification, lasso, penalized logistic regression, penalized method, QSAR
Subjects:Q Science > QA Mathematics
Divisions:Science
ID Code:75755
Deposited By: Widya Wahid
Deposited On:30 Apr 2018 13:15
Last Modified:30 Apr 2018 13:15

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