Universiti Teknologi Malaysia Institutional Repository

SubSS: a protein-protein interaction detection tool

Zaki, Nazar and Deris, Safaai and Saleh, Alwahaishi (2007) SubSS: a protein-protein interaction detection tool. In: 6th IEEE/ACIS International Conference on Computer and Information Science.

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Official URL: http://dx.doi.org/10.1109/ICIS.2007.175


Many essential cellular processes are mediated by protein-protein interaction the reason why predicting protein-protein interaction has recently received considerable attention from biologist around the globe. In this paper, we present a computational tool for detecting protein-protein interaction based on substring similarity measure. Two proteins may interact by the mean of the similarities of the substrings they contain. This friendly and easy to use tool helps biologist to distinguish between high confidence interactions from low confidence or unknown interactions. The tool performance is tested on the currently available protein-protein interaction data for the yeast Saccharomyces cerevisiae, and it delivered considerable improvement over the existing techniques

Item Type:Conference or Workshop Item (Paper)
Subjects:T Technology > T Technology (General)
Divisions:Computer Science and Information System (Formerly known)
ID Code:7386
Deposited By: Nur Amal Zakiah Shamsudin
Deposited On:02 Jan 2009 07:23
Last Modified:27 Apr 2012 08:02

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