Universiti Teknologi Malaysia Institutional Repository

Identification of metabolic pathways using pathfinding approaches: a systematic review

Abd. Algfoor, Zeyad and Sunar, Mohd. Shahrizal and Abdullah, Afnizanfaizal and Kolivand, Hoshang (2017) Identification of metabolic pathways using pathfinding approaches: a systematic review. Briefings in Functional Genomics, 16 (2). pp. 87-98. ISSN 2041-2649

Full text not available from this repository.

Official URL: https://doi.org/10.1093/bfgp/elw002

Abstract

Metabolic pathways have become increasingly available for various microorganisms. Such pathways have spurred the development of a wide array of computational tools, in particular, mathematical pathfinding approaches. This article can facilitate the understanding of computational analysis of metabolic pathways in genomics. Moreover, stoichiometric and pathfinding approaches in metabolic pathway analysis are discussed. Three major types of studies are elaborated: stoichiometric identification models, pathway-based graph analysis and pathfinding approaches in cellular metabolism. Furthermore, evaluation of the outcomes of the pathways with mathematical benchmarking metrics is provided. This review would lead to better comprehension of metabolism behaviors in living cells, in terms of computed pathfinding approaches.

Item Type:Article
Additional Information:RADIS System Ref No:PB/2016/01718
Uncontrolled Keywords:metabolic pathways, identification
Subjects:Q Science > QA Mathematics > QA75 Electronic computers. Computer science
Divisions:Computing
ID Code:66517
Deposited By: Fazli Masari
Deposited On:03 Oct 2017 13:46
Last Modified:03 Oct 2017 13:46

Repository Staff Only: item control page